Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
PSMD4P55036 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PSMD4P55036 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.56■□□□□ 0.4
PSMD4P55036 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PSMD4P55036 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PSMD4P55036 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.56■□□□□ 0.4
PSMD4P55036 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.56■□□□□ 0.4
PSMD4P55036 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.56■□□□□ 0.4
PSMD4P55036 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.56■□□□□ 0.4
PSMD4P55036 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSMD4P55036 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
PSMD4P55036 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 UNC93B2-201ENST00000285383 730 ntBASIC17.55■□□□□ 0.4
PSMD4P55036 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.55■□□□□ 0.4
PSMD4P55036 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PSMD4P55036 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.55■□□□□ 0.4
PSMD4P55036 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.55■□□□□ 0.4
PSMD4P55036 CKBP1-201ENST00000565489 1086 ntBASIC17.55■□□□□ 0.4
PSMD4P55036 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.55■□□□□ 0.4
PSMD4P55036 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.55■□□□□ 0.4
PSMD4P55036 REXO1L10P-201ENST00000615707 1290 ntBASIC17.55■□□□□ 0.4
PSMD4P55036 REXO1L12P-201ENST00000622156 912 ntBASIC17.55■□□□□ 0.4
PSMD4P55036 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.55■□□□□ 0.4
PSMD4P55036 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
PSMD4P55036 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.55■□□□□ 0.4
PSMD4P55036 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
PSMD4P55036 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
PSMD4P55036 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSMD4P55036 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.55■□□□□ 0.4
PSMD4P55036 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
PSMD4P55036 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PSMD4P55036 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PSMD4P55036 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.54■□□□□ 0.4
PSMD4P55036 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSMD4P55036 MESTP1-201ENST00000404287 994 ntBASIC17.54■□□□□ 0.4
PSMD4P55036 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PSMD4P55036 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.54■□□□□ 0.4
PSMD4P55036 SNORA78-201ENST00000459373 127 ntBASIC17.54■□□□□ 0.4
PSMD4P55036 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.54■□□□□ 0.4
PSMD4P55036 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms