Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC1A1P43005 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC1A1P43005 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC1A1P43005 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC1A1P43005 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.75■□□□□ 0.75
SLC1A1P43005 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC1A1P43005 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC1A1P43005 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 AC004951.3-201ENST00000418645 1148 ntBASIC19.75■□□□□ 0.75
SLC1A1P43005 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 AC091390.4-202ENST00000476426 537 ntBASIC19.75■□□□□ 0.75
SLC1A1P43005 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
SLC1A1P43005 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC1A1P43005 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC1A1P43005 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC1A1P43005 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 MTMR9LP-203ENST00000426597 1545 ntBASIC19.75■□□□□ 0.75
SLC1A1P43005 KRT16P1-201ENST00000399124 1418 ntBASIC19.75■□□□□ 0.75
SLC1A1P43005 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC1A1P43005 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC1A1P43005 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC1A1P43005 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC1A1P43005 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC1A1P43005 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC1A1P43005 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
SLC1A1P43005 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC1A1P43005 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC1A1P43005 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC1A1P43005 C1QBPP2-201ENST00000528754 825 ntBASIC19.74■□□□□ 0.75
SLC1A1P43005 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC1A1P43005 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC1A1P43005 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SLC1A1P43005 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SLC1A1P43005 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.73■□□□□ 0.75
SLC1A1P43005 AL031985.4-201ENST00000642138 673 ntBASIC19.73■□□□□ 0.75
SLC1A1P43005 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SLC1A1P43005 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC1A1P43005 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC1A1P43005 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
SLC1A1P43005 AL354751.1-201ENST00000412768 1863 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms