Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT9P35527 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
KRT9P35527 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
KRT9P35527 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.64■□□□□ 0.9
KRT9P35527 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.64■□□□□ 0.9
KRT9P35527 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
KRT9P35527 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT9P35527 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT9P35527 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT9P35527 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT9P35527 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KRT9P35527 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT9P35527 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 KRASP1-201ENST00000407852 552 ntBASIC20.64■□□□□ 0.89
KRT9P35527 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT9P35527 RN7SL471P-201ENST00000580476 299 ntBASIC20.64■□□□□ 0.89
KRT9P35527 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.64■□□□□ 0.89
KRT9P35527 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRT9P35527 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT9P35527 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT9P35527 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT9P35527 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KRT9P35527 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT9P35527 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT9P35527 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
KRT9P35527 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
KRT9P35527 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KRT9P35527 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT9P35527 AC128676.1-201ENST00000454392 318 ntBASIC20.63■□□□□ 0.89
KRT9P35527 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT9P35527 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
KRT9P35527 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KRT9P35527 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT9P35527 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT9P35527 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 NOC2LP1-202ENST00000452600 2235 ntBASIC20.62■□□□□ 0.89
KRT9P35527 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT9P35527 FAM201B-201ENST00000458407 597 ntBASIC20.62■□□□□ 0.89
KRT9P35527 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
KRT9P35527 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT9P35527 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT9P35527 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT9P35527 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.62■□□□□ 0.89
KRT9P35527 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KRT9P35527 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT9P35527 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT9P35527 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms