Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC130P13994 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC130P13994 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC130P13994 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC130P13994 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC130P13994 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC130P13994 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC130P13994 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC130P13994 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC130P13994 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC130P13994 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
CCDC130P13994 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC130P13994 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC130P13994 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC130P13994 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC130P13994 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC130P13994 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC130P13994 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC130P13994 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 TMPOP1-202ENST00000424642 1267 ntBASIC19.95■□□□□ 0.78
CCDC130P13994 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CCDC130P13994 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 AL138966.2-201ENST00000621997 464 ntBASIC19.95■□□□□ 0.78
CCDC130P13994 AC092865.7-201ENST00000641832 219 ntBASIC19.95■□□□□ 0.78
CCDC130P13994 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 AC036111.1-201ENST00000533973 1582 ntBASIC19.95■□□□□ 0.78
CCDC130P13994 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC130P13994 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 AC018445.3-201ENST00000624177 1945 ntBASIC19.94■□□□□ 0.78
CCDC130P13994 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.94■□□□□ 0.78
CCDC130P13994 KRT8P32-201ENST00000512863 1461 ntBASIC19.94■□□□□ 0.78
CCDC130P13994 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC130P13994 MCCD1P1-208ENST00000445732 328 ntBASIC19.94■□□□□ 0.78
CCDC130P13994 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC130P13994 CR769767.2-201ENST00000622735 460 ntBASIC19.94■□□□□ 0.78
CCDC130P13994 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC130P13994 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC130P13994 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CCDC130P13994 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CCDC130P13994 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC130P13994 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC130P13994 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC130P13994 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC130P13994 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC130P13994 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC130P13994 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC130P13994 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC130P13994 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC130P13994 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC130P13994 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC130P13994 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC130P13994 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC130P13994 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC130P13994 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC130P13994 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms