Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MT-CO1P00395 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
MT-CO1P00395 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.31■□□□□ 0.68
MT-CO1P00395 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO1P00395 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.31■□□□□ 0.68
MT-CO1P00395 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO1P00395 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.31■□□□□ 0.68
MT-CO1P00395 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO1P00395 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO1P00395 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-CO1P00395 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-CO1P00395 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 AC141586.3-201ENST00000562166 1838 ntBASIC19.3■□□□□ 0.68
MT-CO1P00395 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-CO1P00395 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-CO1P00395 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-CO1P00395 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-CO1P00395 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
MT-CO1P00395 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-CO1P00395 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-CO1P00395 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MT-CO1P00395 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MT-CO1P00395 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MT-CO1P00395 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
MT-CO1P00395 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
MT-CO1P00395 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-CO1P00395 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MT-CO1P00395 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.29■□□□□ 0.68
MT-CO1P00395 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-CO1P00395 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-CO1P00395 LIN28AP1-201ENST00000429574 405 ntBASIC19.29■□□□□ 0.68
MT-CO1P00395 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
MT-CO1P00395 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-CO1P00395 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-CO1P00395 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-CO1P00395 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 AC004408.2-201ENST00000623613 2777 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.28■□□□□ 0.68
MT-CO1P00395 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-CO1P00395 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MT-CO1P00395 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-CO1P00395 ATP5G1P1-201ENST00000448724 379 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 AC104076.2-201ENST00000448912 469 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-CO1P00395 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
MT-CO1P00395 MIR4674-201ENST00000582457 87 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 AL138966.2-201ENST00000621997 464 ntBASIC19.28■□□□□ 0.68
MT-CO1P00395 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.28■□□□□ 0.68
MT-CO1P00395 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms