Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MID1O15344 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MID1O15344 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
MID1O15344 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MID1O15344 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MID1O15344 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
MID1O15344 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MID1O15344 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MID1O15344 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.89■□□□□ 0.62
MID1O15344 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MID1O15344 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.89■□□□□ 0.61
MID1O15344 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
MID1O15344 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 RASA4DP-201ENST00000460726 1199 ntBASIC18.89■□□□□ 0.61
MID1O15344 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.89■□□□□ 0.61
MID1O15344 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.89■□□□□ 0.61
MID1O15344 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.89■□□□□ 0.61
MID1O15344 AL136038.3-201ENST00000561909 1096 ntBASIC18.89■□□□□ 0.61
MID1O15344 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.89■□□□□ 0.61
MID1O15344 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.89■□□□□ 0.61
MID1O15344 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.89■□□□□ 0.61
MID1O15344 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.89■□□□□ 0.61
MID1O15344 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MID1O15344 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MID1O15344 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MID1O15344 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.89■□□□□ 0.61
MID1O15344 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MID1O15344 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.88■□□□□ 0.61
MID1O15344 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MID1O15344 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
MID1O15344 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.88■□□□□ 0.61
MID1O15344 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.88■□□□□ 0.61
MID1O15344 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.88■□□□□ 0.61
MID1O15344 AC093458.2-201ENST00000623150 629 ntBASIC18.88■□□□□ 0.61
MID1O15344 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 RCC2P3-201ENST00000418112 1537 ntBASIC18.88■□□□□ 0.61
MID1O15344 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MID1O15344 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.88■□□□□ 0.61
MID1O15344 IRX1P1-201ENST00000438849 1838 ntBASIC18.88■□□□□ 0.61
MID1O15344 AL512353.2-201ENST00000448759 1962 ntBASIC18.88■□□□□ 0.61
MID1O15344 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
MID1O15344 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.88■□□□□ 0.61
MID1O15344 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.87■□□□□ 0.61
MID1O15344 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MID1O15344 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.87■□□□□ 0.61
MID1O15344 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
MID1O15344 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.87■□□□□ 0.61
MID1O15344 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 FEM1AP3-201ENST00000403722 1741 ntBASIC18.87■□□□□ 0.61
MID1O15344 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.87■□□□□ 0.61
MID1O15344 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MID1O15344 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
MID1O15344 AC092597.1-201ENST00000487352 616 ntBASIC18.87■□□□□ 0.61
MID1O15344 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.87■□□□□ 0.61
MID1O15344 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
MID1O15344 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.87■□□□□ 0.61
MID1O15344 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MID1O15344 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.86■□□□□ 0.61
MID1O15344 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MID1O15344 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MID1O15344 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MID1O15344 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.86■□□□□ 0.61
MID1O15344 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.86■□□□□ 0.61
MID1O15344 SPDYE13P-201ENST00000445314 798 ntBASIC18.86■□□□□ 0.61
MID1O15344 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.86■□□□□ 0.61
MID1O15344 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms