Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
SRRM3A6NNA2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SRRM3A6NNA2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.52■□□□□ 0.71
SRRM3A6NNA2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SRRM3A6NNA2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 DUX4L26-201ENST00000489078 1255 ntBASIC19.51■□□□□ 0.71
SRRM3A6NNA2 KRT126P-201ENST00000549467 1181 ntBASIC19.51■□□□□ 0.71
SRRM3A6NNA2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRRM3A6NNA2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 SIRPAP1-201ENST00000448467 1770 ntBASIC19.5■□□□□ 0.71
SRRM3A6NNA2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRRM3A6NNA2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 UPK3BP1-201ENST00000428678 509 ntBASIC19.49■□□□□ 0.71
SRRM3A6NNA2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.49■□□□□ 0.71
SRRM3A6NNA2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRRM3A6NNA2 KRT16P6-202ENST00000425692 1426 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms