Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 AC099398.1-201ENST00000567919 2776 ntBASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 AC018553.1-201ENST00000616682 1458 ntBASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 AC007322.1-201ENST00000426983 750 ntBASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 AL589743.5-201ENST00000616611 1050 ntBASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SDHAP1-207ENST00000440850 2000 ntBASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IGKV2-28A0A075B6P5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IGKV2-28A0A075B6P5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IGKV2-28A0A075B6P5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
IGKV2-28A0A075B6P5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms