Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 BX276092.2-201ENST00000417668 665 ntBASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 AL137784.2-201ENST00000607332 1000 ntBASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 AC080038.1-201ENST00000611274 1154 ntBASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV25-1A0A075B6N4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AL139384.1-201ENST00000612143 3047 ntBASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AC141586.5-201ENST00000624546 2050 ntBASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV25-1A0A075B6N4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 AL161938.1-201ENST00000569833 2180 ntBASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 AL031598.1-201ENST00000561511 1773 ntBASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 AC073111.5-205ENST00000641717 521 ntBASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV25-1A0A075B6N4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV25-1A0A075B6N4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV25-1A0A075B6N4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms