Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 KRT18P56-201ENST00000507275 550 ntBASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 RASA4DP-201ENST00000460726 1199 ntBASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.25■□□□□ 0.51
LRIT1Q9P2V4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIT1Q9P2V4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 TEX21P-204ENST00000641479 1693 ntBASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 AC069148.1-201ENST00000608741 768 ntBASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIT1Q9P2V4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms