Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
A1CFQ9NQ94 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.52■■□□□ 1.04
A1CFQ9NQ94 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 SEC1P-202ENST00000473944 940 ntBASIC21.51■■□□□ 1.03
A1CFQ9NQ94 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.51■■□□□ 1.03
A1CFQ9NQ94 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A1CFQ9NQ94 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 HCG4P8-203ENST00000443049 980 ntBASIC21.49■■□□□ 1.03
A1CFQ9NQ94 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
A1CFQ9NQ94 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 KRT18P48-201ENST00000434763 852 ntBASIC21.48■■□□□ 1.03
A1CFQ9NQ94 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.48■■□□□ 1.03
A1CFQ9NQ94 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms