Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40CQ96S21 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RAB40CQ96S21 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
RAB40CQ96S21 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40CQ96S21 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 AC073210.2-201ENST00000430369 194 ntBASIC15.33■□□□□ 0.04
RAB40CQ96S21 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB40CQ96S21 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40CQ96S21 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 GPX1P1-201ENST00000388829 606 ntBASIC15.32■□□□□ 0.04
RAB40CQ96S21 YBX1P10-201ENST00000444752 975 ntBASIC15.32■□□□□ 0.04
RAB40CQ96S21 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 AC067852.2-201ENST00000590513 2313 ntBASIC15.32■□□□□ 0.04
RAB40CQ96S21 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40CQ96S21 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB40CQ96S21 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 AC008764.6-201ENST00000595909 2069 ntBASIC15.31■□□□□ 0.04
RAB40CQ96S21 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 DUX4L16-201ENST00000555130 1264 ntBASIC15.31■□□□□ 0.04
RAB40CQ96S21 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 KRT17P1-201ENST00000399211 1546 ntBASIC15.31■□□□□ 0.04
RAB40CQ96S21 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAB40CQ96S21 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40CQ96S21 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms