Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.99■□□□□ 0.79
CALR3Q96L12 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CALR3Q96L12 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.99■□□□□ 0.79
CALR3Q96L12 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
CALR3Q96L12 AC005332.8-201ENST00000622750 2735 ntBASIC19.98■□□□□ 0.79
CALR3Q96L12 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.98■□□□□ 0.79
CALR3Q96L12 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.98■□□□□ 0.79
CALR3Q96L12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CALR3Q96L12 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.98■□□□□ 0.79
CALR3Q96L12 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.98■□□□□ 0.79
CALR3Q96L12 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.98■□□□□ 0.79
CALR3Q96L12 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CALR3Q96L12 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CALR3Q96L12 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CALR3Q96L12 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.97■□□□□ 0.79
CALR3Q96L12 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CALR3Q96L12 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
CALR3Q96L12 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.97■□□□□ 0.79
CALR3Q96L12 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.97■□□□□ 0.79
CALR3Q96L12 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.97■□□□□ 0.79
CALR3Q96L12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.97■□□□□ 0.79
CALR3Q96L12 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.97■□□□□ 0.79
CALR3Q96L12 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.97■□□□□ 0.79
CALR3Q96L12 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.97■□□□□ 0.79
CALR3Q96L12 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 FZD10-202ENST00000539839 3282 ntBASIC19.97■□□□□ 0.79
CALR3Q96L12 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CALR3Q96L12 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.97■□□□□ 0.79
CALR3Q96L12 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
CALR3Q96L12 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.96■□□□□ 0.79
CALR3Q96L12 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.96■□□□□ 0.79
CALR3Q96L12 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CALR3Q96L12 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.96■□□□□ 0.79
CALR3Q96L12 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 KRT17P3-201ENST00000420566 1262 ntBASIC19.96■□□□□ 0.79
CALR3Q96L12 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.96■□□□□ 0.79
CALR3Q96L12 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALR3Q96L12 RCC2P6-201ENST00000526625 1557 ntBASIC19.95■□□□□ 0.78
CALR3Q96L12 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CALR3Q96L12 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 POU5F1P3-201ENST00000428824 1078 ntBASIC19.95■□□□□ 0.78
CALR3Q96L12 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 PRSS44-201ENST00000515154 1146 ntBASIC19.95■□□□□ 0.78
CALR3Q96L12 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CALR3Q96L12 MTDHP1-201ENST00000605323 784 ntBASIC19.95■□□□□ 0.78
CALR3Q96L12 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.95■□□□□ 0.78
CALR3Q96L12 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms