Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC008040.2-201ENST00000461049 708 ntBASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 Z98044.1-201ENST00000632503 1764 ntBASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLL1Q8TB92 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 FAM207BP-201ENST00000447172 505 ntBASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 PRSS44-201ENST00000515154 1146 ntBASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 AC096733.2-201ENST00000609937 1394 ntBASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCLL1Q8TB92 BICD1-207ENST00000551848 1962 ntBASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 RBM17P1-201ENST00000453646 1190 ntBASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AL355075.4-201ENST00000554988 638 ntBASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 IRX1P1-201ENST00000438849 1838 ntBASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 AL133373.2-201ENST00000623187 2828 ntBASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLL1Q8TB92 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLL1Q8TB92 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms