Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AC099778.1-201ENST00000568593 1911 ntBASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC10.38□□□□□ -0.75
SPTSSBQ8NFR3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 AC005703.6-201ENST00000623265 1329 ntBASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 AC026471.6-201ENST00000622954 1905 ntBASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.37□□□□□ -0.75
SPTSSBQ8NFR3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AC005332.7-201ENST00000614046 2005 ntBASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms