Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 AP001412.1-201ENST00000608405 714 ntBASIC17.68■□□□□ 0.42
NUP43Q8NFH3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 RNF165-205ENST00000588679 2904 ntBASIC17.68■□□□□ 0.42
NUP43Q8NFH3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NUP43Q8NFH3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 CKBP1-201ENST00000565489 1086 ntBASIC17.67■□□□□ 0.42
NUP43Q8NFH3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 HCG11-201ENST00000411553 5696 ntBASIC17.67■□□□□ 0.42
NUP43Q8NFH3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP43Q8NFH3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 MESTP1-201ENST00000404287 994 ntBASIC17.66■□□□□ 0.42
NUP43Q8NFH3 AC012618.2-201ENST00000428058 849 ntBASIC17.66■□□□□ 0.42
NUP43Q8NFH3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms