Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SHFQ7M4L6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
SHFQ7M4L6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SHFQ7M4L6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHFQ7M4L6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.08■□□□□ 0.33
SHFQ7M4L6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHFQ7M4L6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.33
SHFQ7M4L6 FEM1AP3-201ENST00000403722 1741 ntBASIC17.08■□□□□ 0.32
SHFQ7M4L6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 GUSBP6-202ENST00000438529 1198 ntBASIC17.08■□□□□ 0.32
SHFQ7M4L6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.08■□□□□ 0.32
SHFQ7M4L6 PNMA6B-201ENST00000538162 1200 ntBASIC17.08■□□□□ 0.32
SHFQ7M4L6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SHFQ7M4L6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHFQ7M4L6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 AC067852.2-201ENST00000590513 2313 ntBASIC17.07■□□□□ 0.32
SHFQ7M4L6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 MIR935-201ENST00000401179 91 ntBASIC17.07■□□□□ 0.32
SHFQ7M4L6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 AC120498.8-201ENST00000614275 531 ntBASIC17.07■□□□□ 0.32
SHFQ7M4L6 AL121829.2-201ENST00000620908 328 ntBASIC17.07■□□□□ 0.32
SHFQ7M4L6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.07■□□□□ 0.32
SHFQ7M4L6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHFQ7M4L6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms