Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NKX6-1P78426 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX6-1P78426 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 LINC01465-201ENST00000408887 1940 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-1P78426 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NKX6-1P78426 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NKX6-1P78426 HMGA1P5-201ENST00000412453 271 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 AC117947.1-201ENST00000427448 529 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 TPM4P1-201ENST00000436100 807 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.63■□□□□ 0.25
NKX6-1P78426 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 KRT126P-201ENST00000549467 1181 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 SLC25A1P4-201ENST00000567977 778 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NKX6-1P78426 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-1P78426 FAM87A-204ENST00000613235 858 ntBASIC16.63■□□□□ 0.25
NKX6-1P78426 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-1P78426 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-1P78426 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NKX6-1P78426 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-1P78426 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 RNF152P1-201ENST00000397754 604 ntBASIC16.62■□□□□ 0.25
NKX6-1P78426 AC004951.3-201ENST00000418645 1148 ntBASIC16.62■□□□□ 0.25
NKX6-1P78426 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.62■□□□□ 0.25
NKX6-1P78426 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.62■□□□□ 0.25
NKX6-1P78426 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX6-1P78426 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX6-1P78426 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX6-1P78426 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-1P78426 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 AC125437.2-201ENST00000625180 2167 ntBASIC16.62■□□□□ 0.25
NKX6-1P78426 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-1P78426 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-1P78426 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-1P78426 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-1P78426 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX6-1P78426 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 TREX1-205ENST00000625293 1783 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NKX6-1P78426 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NKX6-1P78426 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-1P78426 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX6-1P78426 INGX-201ENST00000359239 846 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX6-1P78426 FAM8A6P-201ENST00000407496 1135 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-1P78426 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 AC092647.4-201ENST00000457211 535 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 AC008040.2-201ENST00000461049 708 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms