Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH12P55289 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH12P55289 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDH12P55289 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 AL354751.1-201ENST00000412768 1863 ntBASIC17.62■□□□□ 0.41
CDH12P55289 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH12P55289 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH12P55289 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH12P55289 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.61■□□□□ 0.41
CDH12P55289 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH12P55289 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH12P55289 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH12P55289 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDH12P55289 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH12P55289 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH12P55289 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDH12P55289 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH12P55289 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDH12P55289 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH12P55289 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH12P55289 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH12P55289 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH12P55289 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CDH12P55289 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDH12P55289 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH12P55289 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH12P55289 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.59■□□□□ 0.41
CDH12P55289 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH12P55289 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 AC008403.3-201ENST00000598924 454 ntBASIC17.59■□□□□ 0.41
CDH12P55289 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.59■□□□□ 0.41
CDH12P55289 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH12P55289 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH12P55289 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH12P55289 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH12P55289 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms