Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR2JP52435 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2JP52435 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR2JP52435 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
POLR2JP52435 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR2JP52435 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
POLR2JP52435 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR2JP52435 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR2JP52435 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.08■□□□□ 0.49
POLR2JP52435 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR2JP52435 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR2JP52435 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2JP52435 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR2JP52435 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
POLR2JP52435 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR2JP52435 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
POLR2JP52435 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR2JP52435 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR2JP52435 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR2JP52435 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
POLR2JP52435 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
POLR2JP52435 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR2JP52435 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR2JP52435 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2JP52435 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
POLR2JP52435 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
POLR2JP52435 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR2JP52435 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR2JP52435 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 HLA-A-209ENST00000638375 975 ntBASIC18.07■□□□□ 0.48
POLR2JP52435 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2JP52435 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2JP52435 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR2JP52435 PCDHB18P-201ENST00000524813 2368 ntBASIC18.06■□□□□ 0.48
POLR2JP52435 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2JP52435 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2JP52435 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR2JP52435 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
POLR2JP52435 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2JP52435 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms