Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.89■□□□□ 0.77
TUBP50607 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TUBP50607 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TUBP50607 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.89■□□□□ 0.77
TUBP50607 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.89■□□□□ 0.77
TUBP50607 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.89■□□□□ 0.77
TUBP50607 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.89■□□□□ 0.77
TUBP50607 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TUBP50607 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TUBP50607 AL138966.2-201ENST00000621997 464 ntBASIC19.89■□□□□ 0.77
TUBP50607 NEFHP1-201ENST00000412845 2629 ntBASIC19.89■□□□□ 0.77
TUBP50607 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
TUBP50607 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TUBP50607 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.88■□□□□ 0.77
TUBP50607 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.88■□□□□ 0.77
TUBP50607 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TUBP50607 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.88■□□□□ 0.77
TUBP50607 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.88■□□□□ 0.77
TUBP50607 BX664615.1-201ENST00000443558 458 ntBASIC19.88■□□□□ 0.77
TUBP50607 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.88■□□□□ 0.77
TUBP50607 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.88■□□□□ 0.77
TUBP50607 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TUBP50607 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.87■□□□□ 0.77
TUBP50607 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TUBP50607 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
TUBP50607 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 AP003041.3-201ENST00000527151 707 ntBASIC19.87■□□□□ 0.77
TUBP50607 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 AL049597.2-201ENST00000565575 961 ntBASIC19.87■□□□□ 0.77
TUBP50607 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.87■□□□□ 0.77
TUBP50607 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TUBP50607 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.87■□□□□ 0.77
TUBP50607 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBP50607 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TUBP50607 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 AP000974.1-201ENST00000623909 2387 ntBASIC19.86■□□□□ 0.77
TUBP50607 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TUBP50607 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TUBP50607 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.86■□□□□ 0.77
TUBP50607 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.86■□□□□ 0.77
TUBP50607 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
TUBP50607 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.86■□□□□ 0.77
TUBP50607 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TUBP50607 AL590326.2-201ENST00000625139 305 ntBASIC19.86■□□□□ 0.77
TUBP50607 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TUBP50607 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBP50607 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBP50607 AC116562.4-201ENST00000641316 2276 ntBASIC19.86■□□□□ 0.77
TUBP50607 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TUBP50607 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms