Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 AC126763.1-201ENST00000552015 2118 ntBASIC16.94■□□□□ 0.3
SOX6P35712 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.94■□□□□ 0.3
SOX6P35712 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SOX6P35712 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 MIR935-201ENST00000401179 91 ntBASIC16.94■□□□□ 0.3
SOX6P35712 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX6P35712 RARRES2P6-201ENST00000567333 442 ntBASIC16.94■□□□□ 0.3
SOX6P35712 MIR6821-201ENST00000617625 74 ntBASIC16.94■□□□□ 0.3
SOX6P35712 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX6P35712 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX6P35712 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX6P35712 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX6P35712 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX6P35712 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX6P35712 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SOX6P35712 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.93■□□□□ 0.3
SOX6P35712 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 CCDC92B-201ENST00000575506 885 ntBASIC16.93■□□□□ 0.3
SOX6P35712 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX6P35712 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SOX6P35712 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX6P35712 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX6P35712 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX6P35712 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX6P35712 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SOX6P35712 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX6P35712 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SOX6P35712 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SOX6P35712 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms