Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.2■□□□□ 0.5
CAPN3P20807 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.2■□□□□ 0.5
CAPN3P20807 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN3P20807 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CAPN3P20807 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.2■□□□□ 0.5
CAPN3P20807 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.2■□□□□ 0.5
CAPN3P20807 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CAPN3P20807 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CAPN3P20807 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN3P20807 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN3P20807 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN3P20807 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN3P20807 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN3P20807 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CAPN3P20807 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.19■□□□□ 0.5
CAPN3P20807 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.19■□□□□ 0.5
CAPN3P20807 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN3P20807 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CAPN3P20807 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN3P20807 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CAPN3P20807 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN3P20807 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CAPN3P20807 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CAPN3P20807 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CAPN3P20807 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN3P20807 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN3P20807 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CAPN3P20807 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN3P20807 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN3P20807 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN3P20807 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.17■□□□□ 0.5
CAPN3P20807 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN3P20807 TUBB8P6-201ENST00000436895 1288 ntBASIC18.17■□□□□ 0.5
CAPN3P20807 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN3P20807 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN3P20807 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CAPN3P20807 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN3P20807 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN3P20807 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN3P20807 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CAPN3P20807 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN3P20807 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.16■□□□□ 0.5
CAPN3P20807 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CAPN3P20807 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.16■□□□□ 0.5
CAPN3P20807 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.16■□□□□ 0.5
CAPN3P20807 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.16■□□□□ 0.5
CAPN3P20807 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN3P20807 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CAPN3P20807 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms