Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.73■□□□□ 0.91
ITGA4P13612 COX11P1-201ENST00000489116 835 ntBASIC20.73■□□□□ 0.91
ITGA4P13612 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.73■□□□□ 0.91
ITGA4P13612 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.73■□□□□ 0.91
ITGA4P13612 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.73■□□□□ 0.91
ITGA4P13612 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ITGA4P13612 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
ITGA4P13612 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ITGA4P13612 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.73■□□□□ 0.91
ITGA4P13612 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.73■□□□□ 0.91
ITGA4P13612 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA4P13612 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA4P13612 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA4P13612 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA4P13612 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.73■□□□□ 0.91
ITGA4P13612 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA4P13612 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ITGA4P13612 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.73■□□□□ 0.91
ITGA4P13612 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ITGA4P13612 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ITGA4P13612 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 SDHAP1-207ENST00000440850 2000 ntBASIC20.72■□□□□ 0.91
ITGA4P13612 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.72■□□□□ 0.91
ITGA4P13612 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.72■□□□□ 0.91
ITGA4P13612 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
ITGA4P13612 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.72■□□□□ 0.91
ITGA4P13612 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 AC087388.1-201ENST00000571370 1112 ntBASIC20.72■□□□□ 0.91
ITGA4P13612 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ITGA4P13612 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.72■□□□□ 0.91
ITGA4P13612 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.72■□□□□ 0.91
ITGA4P13612 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA4P13612 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.71■□□□□ 0.91
ITGA4P13612 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 RNF152P1-201ENST00000397754 604 ntBASIC20.71■□□□□ 0.91
ITGA4P13612 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ITGA4P13612 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.71■□□□□ 0.91
ITGA4P13612 YBX1P2-201ENST00000489612 999 ntBASIC20.71■□□□□ 0.91
ITGA4P13612 AC063952.2-201ENST00000498792 1227 ntBASIC20.71■□□□□ 0.91
ITGA4P13612 AC022616.7-201ENST00000525383 220 ntBASIC20.71■□□□□ 0.91
ITGA4P13612 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA4P13612 LINC01238-205ENST00000567549 1107 ntBASIC20.71■□□□□ 0.91
ITGA4P13612 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA4P13612 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ITGA4P13612 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.71■□□□□ 0.91
ITGA4P13612 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ITGA4P13612 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
ITGA4P13612 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.71■□□□□ 0.91
ITGA4P13612 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA4P13612 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ITGA4P13612 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ITGA4P13612 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ITGA4P13612 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
ITGA4P13612 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.7■□□□□ 0.9
ITGA4P13612 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.7■□□□□ 0.9
ITGA4P13612 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 AC093503.3-201ENST00000624917 2352 ntBASIC20.7■□□□□ 0.9
ITGA4P13612 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 TSPY21P-201ENST00000433481 731 ntBASIC20.7■□□□□ 0.9
ITGA4P13612 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.7■□□□□ 0.9
ITGA4P13612 TSPY23P-201ENST00000440136 739 ntBASIC20.7■□□□□ 0.9
ITGA4P13612 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ITGA4P13612 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA4P13612 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.7■□□□□ 0.9
ITGA4P13612 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms