Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 AL390961.4-201ENST00000623958 2535 ntBASIC18.07■□□□□ 0.48
BCKDHAP12694 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BCKDHAP12694 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BCKDHAP12694 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BCKDHAP12694 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
BCKDHAP12694 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BCKDHAP12694 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 RCC2P6-201ENST00000526625 1557 ntBASIC18.06■□□□□ 0.48
BCKDHAP12694 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BCKDHAP12694 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHAP12694 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
BCKDHAP12694 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.06■□□□□ 0.48
BCKDHAP12694 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHAP12694 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHAP12694 RN7SL471P-201ENST00000580476 299 ntBASIC18.06■□□□□ 0.48
BCKDHAP12694 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHAP12694 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 KRT8P11-201ENST00000409686 1436 ntBASIC18.06■□□□□ 0.48
BCKDHAP12694 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
BCKDHAP12694 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHAP12694 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.05■□□□□ 0.48
BCKDHAP12694 AC110285.5-201ENST00000611501 352 ntBASIC18.05■□□□□ 0.48
BCKDHAP12694 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 AC079598.2-202ENST00000546624 1451 ntBASIC18.05■□□□□ 0.48
BCKDHAP12694 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 HEIH-201ENST00000623091 1652 ntBASIC18.05■□□□□ 0.48
BCKDHAP12694 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
BCKDHAP12694 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHAP12694 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHAP12694 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BCKDHAP12694 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BCKDHAP12694 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.04■□□□□ 0.48
BCKDHAP12694 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BCKDHAP12694 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHAP12694 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHAP12694 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHAP12694 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHAP12694 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHAP12694 AC131212.4-201ENST00000623606 975 ntBASIC18.04■□□□□ 0.48
BCKDHAP12694 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHAP12694 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms