Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
APOA4P06727 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
APOA4P06727 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.95■□□□□ 0.62
APOA4P06727 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.95■□□□□ 0.62
APOA4P06727 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
APOA4P06727 AC131212.4-201ENST00000623606 975 ntBASIC18.95■□□□□ 0.62
APOA4P06727 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.95■□□□□ 0.62
APOA4P06727 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.95■□□□□ 0.62
APOA4P06727 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.95■□□□□ 0.62
APOA4P06727 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 AL512353.2-201ENST00000448759 1962 ntBASIC18.95■□□□□ 0.62
APOA4P06727 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
APOA4P06727 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOA4P06727 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
APOA4P06727 AC009113.1-201ENST00000570267 2443 ntBASIC18.94■□□□□ 0.62
APOA4P06727 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
APOA4P06727 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.94■□□□□ 0.62
APOA4P06727 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.94■□□□□ 0.62
APOA4P06727 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.94■□□□□ 0.62
APOA4P06727 AC073195.1-201ENST00000607241 877 ntBASIC18.94■□□□□ 0.62
APOA4P06727 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.94■□□□□ 0.62
APOA4P06727 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
APOA4P06727 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.94■□□□□ 0.62
APOA4P06727 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
APOA4P06727 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOA4P06727 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APOA4P06727 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
APOA4P06727 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.93■□□□□ 0.62
APOA4P06727 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
APOA4P06727 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.93■□□□□ 0.62
APOA4P06727 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.93■□□□□ 0.62
APOA4P06727 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.93■□□□□ 0.62
APOA4P06727 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.93■□□□□ 0.62
APOA4P06727 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.93■□□□□ 0.62
APOA4P06727 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.93■□□□□ 0.62
APOA4P06727 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
APOA4P06727 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
APOA4P06727 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.93■□□□□ 0.62
APOA4P06727 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOA4P06727 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 KRT16P1-201ENST00000399124 1418 ntBASIC18.92■□□□□ 0.62
APOA4P06727 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.92■□□□□ 0.62
APOA4P06727 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
APOA4P06727 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 RPS2P4-201ENST00000476944 856 ntBASIC18.92■□□□□ 0.62
APOA4P06727 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.92■□□□□ 0.62
APOA4P06727 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.92■□□□□ 0.62
APOA4P06727 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 AP001412.1-201ENST00000608405 714 ntBASIC18.92■□□□□ 0.62
APOA4P06727 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms