Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF254O75437 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
ZNF254O75437 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF254O75437 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF254O75437 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF254O75437 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF254O75437 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF254O75437 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZNF254O75437 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF254O75437 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZNF254O75437 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 AL160286.2-201ENST00000567150 934 ntBASIC16.75■□□□□ 0.27
ZNF254O75437 AC004264.1-201ENST00000608354 794 ntBASIC16.75■□□□□ 0.27
ZNF254O75437 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.75■□□□□ 0.27
ZNF254O75437 AC083906.6-201ENST00000641366 219 ntBASIC16.75■□□□□ 0.27
ZNF254O75437 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF254O75437 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF254O75437 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF254O75437 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.74■□□□□ 0.27
ZNF254O75437 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF254O75437 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF254O75437 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF254O75437 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ZNF254O75437 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ZNF254O75437 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 BICD1-207ENST00000551848 1962 ntBASIC16.74■□□□□ 0.27
ZNF254O75437 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF254O75437 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF254O75437 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF254O75437 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF254O75437 FZD10-202ENST00000539839 3282 ntBASIC16.74■□□□□ 0.27
ZNF254O75437 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF254O75437 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ZNF254O75437 NBPF21P-201ENST00000425093 1451 ntBASIC16.73■□□□□ 0.27
ZNF254O75437 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF254O75437 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF254O75437 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF254O75437 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.73■□□□□ 0.27
ZNF254O75437 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF254O75437 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.73■□□□□ 0.27
ZNF254O75437 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
ZNF254O75437 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF254O75437 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF254O75437 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms