Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHF1O43189 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHF1O43189 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHF1O43189 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHF1O43189 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHF1O43189 NEFHP1-201ENST00000412845 2629 ntBASIC16.32■□□□□ 0.2
PHF1O43189 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 UNC93B2-201ENST00000285383 730 ntBASIC16.32■□□□□ 0.2
PHF1O43189 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.32■□□□□ 0.2
PHF1O43189 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PHF1O43189 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.32■□□□□ 0.2
PHF1O43189 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.32■□□□□ 0.2
PHF1O43189 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.32■□□□□ 0.2
PHF1O43189 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PHF1O43189 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.32■□□□□ 0.2
PHF1O43189 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.32■□□□□ 0.2
PHF1O43189 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.32■□□□□ 0.2
PHF1O43189 AP000525.1-201ENST00000608286 694 ntBASIC16.32■□□□□ 0.2
PHF1O43189 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.32■□□□□ 0.2
PHF1O43189 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
PHF1O43189 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.32■□□□□ 0.2
PHF1O43189 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.32■□□□□ 0.2
PHF1O43189 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHF1O43189 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PHF1O43189 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PHF1O43189 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 KRT18P22-201ENST00000402024 1347 ntBASIC16.31■□□□□ 0.2
PHF1O43189 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 MIR1238-201ENST00000408483 83 ntBASIC16.31■□□□□ 0.2
PHF1O43189 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 AP002982.1-201ENST00000492365 877 ntBASIC16.31■□□□□ 0.2
PHF1O43189 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.31■□□□□ 0.2
PHF1O43189 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.31■□□□□ 0.2
PHF1O43189 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.31■□□□□ 0.2
PHF1O43189 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.31■□□□□ 0.2
PHF1O43189 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHF1O43189 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PHF1O43189 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHF1O43189 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms