Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBFD1O14562 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBFD1O14562 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBFD1O14562 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.37■□□□□ 0.53
UBFD1O14562 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.36■□□□□ 0.53
UBFD1O14562 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.36■□□□□ 0.53
UBFD1O14562 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBFD1O14562 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBFD1O14562 MTMR9LP-203ENST00000426597 1545 ntBASIC18.36■□□□□ 0.53
UBFD1O14562 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UBFD1O14562 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.36■□□□□ 0.53
UBFD1O14562 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.36■□□□□ 0.53
UBFD1O14562 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.36■□□□□ 0.53
UBFD1O14562 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.36■□□□□ 0.53
UBFD1O14562 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.36■□□□□ 0.53
UBFD1O14562 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBFD1O14562 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBFD1O14562 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBFD1O14562 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.35■□□□□ 0.53
UBFD1O14562 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBFD1O14562 KRT8P11-201ENST00000409686 1436 ntBASIC18.35■□□□□ 0.53
UBFD1O14562 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.35■□□□□ 0.53
UBFD1O14562 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.35■□□□□ 0.53
UBFD1O14562 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.35■□□□□ 0.53
UBFD1O14562 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.35■□□□□ 0.53
UBFD1O14562 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 KRASP1-201ENST00000407852 552 ntBASIC18.35■□□□□ 0.53
UBFD1O14562 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
UBFD1O14562 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.35■□□□□ 0.53
UBFD1O14562 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.35■□□□□ 0.53
UBFD1O14562 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
UBFD1O14562 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBFD1O14562 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.34■□□□□ 0.53
UBFD1O14562 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.34■□□□□ 0.53
UBFD1O14562 KRT16P5-201ENST00000455284 522 ntBASIC18.34■□□□□ 0.53
UBFD1O14562 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.34■□□□□ 0.53
UBFD1O14562 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.34■□□□□ 0.53
UBFD1O14562 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
UBFD1O14562 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.34■□□□□ 0.53
UBFD1O14562 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.34■□□□□ 0.53
UBFD1O14562 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.34■□□□□ 0.53
UBFD1O14562 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.34■□□□□ 0.53
UBFD1O14562 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.34■□□□□ 0.53
UBFD1O14562 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
UBFD1O14562 AC068587.9-201ENST00000641814 219 ntBASIC18.34■□□□□ 0.53
UBFD1O14562 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.34■□□□□ 0.53
UBFD1O14562 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
UBFD1O14562 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBFD1O14562 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.33■□□□□ 0.53
UBFD1O14562 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.33■□□□□ 0.53
UBFD1O14562 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBFD1O14562 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.33■□□□□ 0.53
UBFD1O14562 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.33■□□□□ 0.53
UBFD1O14562 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.33■□□□□ 0.52
UBFD1O14562 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms