Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.3■■□□□ 1.48
CHL1O00533 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.3■■□□□ 1.48
CHL1O00533 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.3■■□□□ 1.48
CHL1O00533 KRT18P38-201ENST00000449496 1282 ntBASIC24.3■■□□□ 1.48
CHL1O00533 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.3■■□□□ 1.48
CHL1O00533 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.3■■□□□ 1.48
CHL1O00533 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CHL1O00533 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC24.3■■□□□ 1.48
CHL1O00533 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHL1O00533 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.3■■□□□ 1.48
CHL1O00533 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHL1O00533 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.29■■□□□ 1.48
CHL1O00533 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.29■■□□□ 1.48
CHL1O00533 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.29■■□□□ 1.48
CHL1O00533 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.29■■□□□ 1.48
CHL1O00533 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.29■■□□□ 1.48
CHL1O00533 HOMER2P1-201ENST00000455653 964 ntBASIC24.29■■□□□ 1.48
CHL1O00533 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.29■■□□□ 1.48
CHL1O00533 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.29■■□□□ 1.48
CHL1O00533 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.29■■□□□ 1.48
CHL1O00533 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.29■■□□□ 1.48
CHL1O00533 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHL1O00533 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHL1O00533 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC24.28■■□□□ 1.48
CHL1O00533 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 SEC1P-202ENST00000473944 940 ntBASIC24.28■■□□□ 1.48
CHL1O00533 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.28■■□□□ 1.48
CHL1O00533 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.28■■□□□ 1.48
CHL1O00533 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.28■■□□□ 1.48
CHL1O00533 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CHL1O00533 MTMR9LP-203ENST00000426597 1545 ntBASIC24.28■■□□□ 1.48
CHL1O00533 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.28■■□□□ 1.48
CHL1O00533 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.28■■□□□ 1.48
CHL1O00533 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CHL1O00533 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHL1O00533 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.27■■□□□ 1.48
CHL1O00533 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC24.27■■□□□ 1.48
CHL1O00533 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CHL1O00533 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.27■■□□□ 1.48
CHL1O00533 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.27■■□□□ 1.48
CHL1O00533 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CHL1O00533 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.27■■□□□ 1.48
CHL1O00533 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.27■■□□□ 1.48
CHL1O00533 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHL1O00533 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.26■■□□□ 1.47
CHL1O00533 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
CHL1O00533 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.26■■□□□ 1.47
CHL1O00533 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CHL1O00533 ARMC10P1-201ENST00000313754 855 ntBASIC24.26■■□□□ 1.47
CHL1O00533 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 AL031133.1-201ENST00000406807 723 ntBASIC24.26■■□□□ 1.47
CHL1O00533 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.26■■□□□ 1.47
CHL1O00533 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.26■■□□□ 1.47
CHL1O00533 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.26■■□□□ 1.47
CHL1O00533 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.26■■□□□ 1.47
CHL1O00533 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHL1O00533 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.26■■□□□ 1.47
CHL1O00533 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
CHL1O00533 AC024243.1-201ENST00000609234 778 ntBASIC24.26■■□□□ 1.47
CHL1O00533 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms