Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EIF3FO00303 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.5■□□□□ 0.55
EIF3FO00303 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.5■□□□□ 0.55
EIF3FO00303 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.5■□□□□ 0.55
EIF3FO00303 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.5■□□□□ 0.55
EIF3FO00303 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
EIF3FO00303 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.5■□□□□ 0.55
EIF3FO00303 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.5■□□□□ 0.55
EIF3FO00303 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.5■□□□□ 0.55
EIF3FO00303 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
EIF3FO00303 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.49■□□□□ 0.55
EIF3FO00303 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.49■□□□□ 0.55
EIF3FO00303 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
EIF3FO00303 AC097488.1-201ENST00000507834 756 ntBASIC18.49■□□□□ 0.55
EIF3FO00303 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 SLC25A1P4-201ENST00000567977 778 ntBASIC18.49■□□□□ 0.55
EIF3FO00303 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
EIF3FO00303 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
EIF3FO00303 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF3FO00303 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
EIF3FO00303 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
EIF3FO00303 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
EIF3FO00303 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EIF3FO00303 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
EIF3FO00303 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EIF3FO00303 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.48■□□□□ 0.55
EIF3FO00303 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 AP003071.4-201ENST00000562276 1284 ntBASIC18.48■□□□□ 0.55
EIF3FO00303 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
EIF3FO00303 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.48■□□□□ 0.55
EIF3FO00303 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.48■□□□□ 0.55
EIF3FO00303 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
EIF3FO00303 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EIF3FO00303 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.47■□□□□ 0.55
EIF3FO00303 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
EIF3FO00303 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 AC004408.2-201ENST00000623613 2777 ntBASIC18.47■□□□□ 0.55
EIF3FO00303 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
EIF3FO00303 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.47■□□□□ 0.55
EIF3FO00303 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
EIF3FO00303 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.47■□□□□ 0.55
EIF3FO00303 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EIF3FO00303 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EIF3FO00303 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.46■□□□□ 0.55
EIF3FO00303 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.46■□□□□ 0.55
EIF3FO00303 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms