Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PTBP1P-201ENST00000554374 1601 ntBASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HLA-G-202ENST00000376815 851 ntBASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HLA-G-203ENST00000376818 1127 ntBASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 BX842568.3-201ENST00000418104 571 ntBASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CDV3P1-201ENST00000471403 739 ntBASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PCDHA12-202ENST00000613593 2588 ntBASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC105265.2-201ENST00000467189 838 ntBASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 IGHV3-19-201ENST00000521488 291 ntBASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC138907.5-202ENST00000569484 235 ntBASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms