Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC188H7C350 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC188H7C350 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC188H7C350 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC188H7C350 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC188H7C350 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC188H7C350 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC188H7C350 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC188H7C350 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC188H7C350 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC188H7C350 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC188H7C350 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC188H7C350 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC188H7C350 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 AC026271.2-201ENST00000428091 497 ntBASIC19.65■□□□□ 0.74
CCDC188H7C350 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 AC120498.8-201ENST00000614275 531 ntBASIC19.65■□□□□ 0.74
CCDC188H7C350 AC073111.5-205ENST00000641717 521 ntBASIC19.65■□□□□ 0.74
CCDC188H7C350 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC188H7C350 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 AC138932.1-201ENST00000534164 6830 ntBASIC19.65■□□□□ 0.74
CCDC188H7C350 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC188H7C350 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC188H7C350 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CCDC188H7C350 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC188H7C350 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC188H7C350 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC188H7C350 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC188H7C350 HCG11-201ENST00000411553 5696 ntBASIC19.64■□□□□ 0.74
CCDC188H7C350 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC188H7C350 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC188H7C350 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC188H7C350 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC188H7C350 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC188H7C350 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC188H7C350 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC188H7C350 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC188H7C350 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC188H7C350 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC188H7C350 AL160286.2-201ENST00000567150 934 ntBASIC19.64■□□□□ 0.73
CCDC188H7C350 AC080038.1-201ENST00000611274 1154 ntBASIC19.64■□□□□ 0.73
CCDC188H7C350 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC188H7C350 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC188H7C350 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCDC188H7C350 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC188H7C350 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC188H7C350 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC188H7C350 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC188H7C350 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC188H7C350 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC188H7C350 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC188H7C350 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC188H7C350 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC188H7C350 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC188H7C350 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms