Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 TSPY7P-201ENST00000431358 1114 ntBASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 AC131212.4-201ENST00000623606 975 ntBASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 AC135050.7-201ENST00000624508 2218 ntBASIC17.74■□□□□ 0.43
PRAMEF25A6NGN4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 MIR4497-201ENST00000583208 89 ntBASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 MIR4785-201ENST00000585005 73 ntBASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 AL031985.4-201ENST00000642138 673 ntBASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF25A6NGN4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AC090164.3-201ENST00000610780 2143 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AL596275.1-201ENST00000423464 877 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AC004980.1-204ENST00000429707 299 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AL160286.2-201ENST00000567150 934 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AC026271.3-201ENST00000571884 352 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AC026471.5-201ENST00000615068 467 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 AC026471.1-201ENST00000564629 3026 ntBASIC17.72■□□□□ 0.43
PRAMEF25A6NGN4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 AL355355.2-201ENST00000442321 338 ntBASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF25A6NGN4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms