Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 AC010980.2-201ENST00000587099 1412 ntBASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MEIS3P1A6NDR6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.21■□□□□ 0.18
MEIS3P1A6NDR6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MEIS3P1A6NDR6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MEIS3P1A6NDR6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MEIS3P1A6NDR6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MEIS3P1A6NDR6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 AC139713.2-201ENST00000641328 2723 ntBASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MEIS3P1A6NDR6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 FEM1AP3-201ENST00000403722 1741 ntBASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 AC020916.1-201ENST00000587762 1774 ntBASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 AC124283.5-201ENST00000624661 1809 ntBASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MEIS3P1A6NDR6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MEIS3P1A6NDR6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms