Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 AC099398.1-201ENST00000567919 2776 ntBASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 YBX1P10-201ENST00000444752 975 ntBASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB4Q9UN71 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 AL354751.1-201ENST00000412768 1863 ntBASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGB4Q9UN71 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 AC060766.5-201ENST00000590539 871 ntBASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 BICD1-207ENST00000551848 1962 ntBASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 WIZP1-201ENST00000531444 2299 ntBASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB4Q9UN71 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 PKD1P1-201ENST00000458669 6805 ntBASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 PNMA6B-201ENST00000538162 1200 ntBASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 AC090164.3-201ENST00000610780 2143 ntBASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 KRT8P8-201ENST00000434750 1448 ntBASIC18.32■□□□□ 0.52
PCDHGB4Q9UN71 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 AL161938.1-201ENST00000569833 2180 ntBASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 AC141586.3-201ENST00000562166 1838 ntBASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB4Q9UN71 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms