Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPAQ9P0L0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 ABALON-201ENST00000629058 1903 ntBASIC17.91■□□□□ 0.46
VAPAQ9P0L0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPAQ9P0L0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPAQ9P0L0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAPAQ9P0L0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAPAQ9P0L0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 UNC93B4-201ENST00000505679 747 ntBASIC17.89■□□□□ 0.45
VAPAQ9P0L0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPAQ9P0L0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms