Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 AC009113.1-201ENST00000570267 2443 ntBASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 AC124283.5-201ENST00000624661 1809 ntBASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 AC005082.1-201ENST00000413042 2259 ntBASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.73■□□□□ 0.11
LIN7CQ9NUP9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 AC104581.1-202ENST00000635932 2618 ntBASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIN7CQ9NUP9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms