Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FEM1AP3-201ENST00000403722 1741 ntBASIC19.05■□□□□ 0.64
VPS11Q9H270 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
VPS11Q9H270 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS11Q9H270 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 AP000997.3-201ENST00000623333 2250 ntBASIC19.04■□□□□ 0.64
VPS11Q9H270 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS11Q9H270 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VPS11Q9H270 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS11Q9H270 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 SOX15-203ENST00000570788 1093 ntBASIC19.04■□□□□ 0.64
VPS11Q9H270 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS11Q9H270 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS11Q9H270 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
VPS11Q9H270 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS11Q9H270 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS11Q9H270 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS11Q9H270 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VPS11Q9H270 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS11Q9H270 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
VPS11Q9H270 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
VPS11Q9H270 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 AC098934.4-201ENST00000564127 592 ntBASIC19.03■□□□□ 0.64
VPS11Q9H270 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.03■□□□□ 0.64
VPS11Q9H270 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.03■□□□□ 0.64
VPS11Q9H270 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.03■□□□□ 0.64
VPS11Q9H270 AL121829.2-201ENST00000620908 328 ntBASIC19.03■□□□□ 0.64
VPS11Q9H270 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS11Q9H270 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS11Q9H270 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS11Q9H270 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VPS11Q9H270 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS11Q9H270 ANO7L1-203ENST00000602586 1720 ntBASIC19.03■□□□□ 0.64
VPS11Q9H270 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS11Q9H270 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 ABALON-201ENST00000629058 1903 ntBASIC19.02■□□□□ 0.64
VPS11Q9H270 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS11Q9H270 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS11Q9H270 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS11Q9H270 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
VPS11Q9H270 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
VPS11Q9H270 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VPS11Q9H270 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS11Q9H270 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS11Q9H270 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms