Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 AC116562.2-201ENST00000507042 360 ntBASIC21.98■■□□□ 1.11
SDF4Q9BRK5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 AC026271.3-201ENST00000571884 352 ntBASIC21.98■■□□□ 1.11
SDF4Q9BRK5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.98■■□□□ 1.11
SDF4Q9BRK5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 UNC93B2-201ENST00000285383 730 ntBASIC21.97■■□□□ 1.11
SDF4Q9BRK5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 RBM17P1-201ENST00000453646 1190 ntBASIC21.97■■□□□ 1.11
SDF4Q9BRK5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 HLA-A-209ENST00000638375 975 ntBASIC21.97■■□□□ 1.11
SDF4Q9BRK5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDF4Q9BRK5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 AL049812.1-201ENST00000432563 2267 ntBASIC21.96■■□□□ 1.11
SDF4Q9BRK5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDF4Q9BRK5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SDF4Q9BRK5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
SDF4Q9BRK5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 TEX21P-204ENST00000641479 1693 ntBASIC21.95■■□□□ 1.1
SDF4Q9BRK5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 AC141586.3-201ENST00000562166 1838 ntBASIC21.95■■□□□ 1.1
SDF4Q9BRK5 AC004980.1-204ENST00000429707 299 ntBASIC21.95■■□□□ 1.1
SDF4Q9BRK5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.95■■□□□ 1.1
SDF4Q9BRK5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 FSCN1P1-201ENST00000568912 1481 ntBASIC21.95■■□□□ 1.1
SDF4Q9BRK5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDF4Q9BRK5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 AC211429.1-201ENST00000415277 523 ntBASIC21.94■■□□□ 1.1
SDF4Q9BRK5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 NEFHP1-201ENST00000412845 2629 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms