Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3S1Q92572 OR6D1P-203ENST00000641209 4860 ntBASIC16.69■□□□□ 0.26
AP3S1Q92572 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3S1Q92572 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.69■□□□□ 0.26
AP3S1Q92572 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S1Q92572 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S1Q92572 SDHAP1-207ENST00000440850 2000 ntBASIC16.69■□□□□ 0.26
AP3S1Q92572 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3S1Q92572 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
AP3S1Q92572 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP3S1Q92572 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3S1Q92572 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3S1Q92572 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.68■□□□□ 0.26
AP3S1Q92572 SLC25A6P5-201ENST00000435663 894 ntBASIC16.68■□□□□ 0.26
AP3S1Q92572 AC091305.1-201ENST00000479476 895 ntBASIC16.68■□□□□ 0.26
AP3S1Q92572 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.68■□□□□ 0.26
AP3S1Q92572 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.68■□□□□ 0.26
AP3S1Q92572 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3S1Q92572 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3S1Q92572 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.68■□□□□ 0.26
AP3S1Q92572 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 AC105020.6-201ENST00000621523 1217 ntBASIC16.68■□□□□ 0.26
AP3S1Q92572 AC009053.2-201ENST00000563701 2365 ntBASIC16.68■□□□□ 0.26
AP3S1Q92572 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 AC104417.2-201ENST00000562989 1793 ntBASIC16.68■□□□□ 0.26
AP3S1Q92572 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S1Q92572 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
AP3S1Q92572 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 CROCCP1-201ENST00000426910 5675 ntBASIC16.67■□□□□ 0.26
AP3S1Q92572 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3S1Q92572 EDA-201ENST00000338901 1233 ntBASIC16.67■□□□□ 0.26
AP3S1Q92572 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
AP3S1Q92572 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S1Q92572 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
AP3S1Q92572 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
AP3S1Q92572 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.66■□□□□ 0.26
AP3S1Q92572 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.66■□□□□ 0.26
AP3S1Q92572 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 MCRIP2P1-201ENST00000394346 511 ntBASIC16.66■□□□□ 0.26
AP3S1Q92572 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
AP3S1Q92572 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S1Q92572 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3S1Q92572 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms