Protein–RNA interactions for Protein: Q8N7F7

UBL4B, Ubiquitin-like protein 4B, humanhuman

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4BQ8N7F7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 BICD1-207ENST00000551848 1962 ntBASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4BQ8N7F7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 NBPF21P-201ENST00000425093 1451 ntBASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 C1QL1P1-201ENST00000568105 661 ntBASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 AC004264.1-201ENST00000608354 794 ntBASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 HLA-A-209ENST00000638375 975 ntBASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4BQ8N7F7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 TSPY23P-201ENST00000440136 739 ntBASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4BQ8N7F7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4BQ8N7F7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms