Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 DUSP5P2-201ENST00000426873 1033 ntBASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 AC020916.1-201ENST00000587762 1774 ntBASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRTM1Q86UE6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 TSPY21P-201ENST00000433481 731 ntBASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 AC090340.1-201ENST00000620778 4980 ntBASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRRTM1Q86UE6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 AC008764.6-201ENST00000595909 2069 ntBASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms