Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 AC008406.3-201ENST00000620001 1374 ntBASIC15.75■□□□□ 0.11
ZNF546Q86UE3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 AC131212.1-201ENST00000613771 668 ntBASIC15.74■□□□□ 0.11
ZNF546Q86UE3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ZNF546Q86UE3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 AC105265.2-201ENST00000467189 838 ntBASIC15.73■□□□□ 0.11
ZNF546Q86UE3 CCDC92B-201ENST00000575506 885 ntBASIC15.73■□□□□ 0.11
ZNF546Q86UE3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 AC243732.1-201ENST00000612648 864 ntBASIC15.73■□□□□ 0.11
ZNF546Q86UE3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ZNF546Q86UE3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AC087633.2-202ENST00000565166 1439 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms