Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
RBM48Q5RL73 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 PCDHA12-202ENST00000613593 2588 ntBASIC17.29■□□□□ 0.36
RBM48Q5RL73 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM48Q5RL73 LINC02228-203ENST00000641970 1355 ntBASIC17.28■□□□□ 0.36
RBM48Q5RL73 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 AC027612.3-201ENST00000413684 1047 ntBASIC17.28■□□□□ 0.36
RBM48Q5RL73 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM48Q5RL73 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.28■□□□□ 0.36
RBM48Q5RL73 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RBM48Q5RL73 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RBM48Q5RL73 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RBM48Q5RL73 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.27■□□□□ 0.36
RBM48Q5RL73 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.27■□□□□ 0.36
RBM48Q5RL73 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RBM48Q5RL73 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.27■□□□□ 0.35
RBM48Q5RL73 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RBM48Q5RL73 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 KRT18P68-201ENST00000392293 1000 ntBASIC17.26■□□□□ 0.35
RBM48Q5RL73 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 SUDS3P1-201ENST00000505831 966 ntBASIC17.26■□□□□ 0.35
RBM48Q5RL73 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AC016405.3-201ENST00000607710 860 ntBASIC17.26■□□□□ 0.35
RBM48Q5RL73 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.26■□□□□ 0.35
RBM48Q5RL73 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RBM48Q5RL73 AL645608.8-201ENST00000606034 2086 ntBASIC17.25■□□□□ 0.35
RBM48Q5RL73 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RBM48Q5RL73 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms