Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 AC008040.2-201ENST00000461049 708 ntBASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 DUX4L26-201ENST00000489078 1255 ntBASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 AC011298.2-201ENST00000617989 482 ntBASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 AC130371.2-201ENST00000619443 611 ntBASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HERC4Q5GLZ8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 KRT8P11-201ENST00000409686 1436 ntBASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 LINC01568-207ENST00000641790 1380 ntBASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 AL137013.1-201ENST00000432946 1228 ntBASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 RBM17P1-201ENST00000453646 1190 ntBASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 AC087388.1-201ENST00000571370 1112 ntBASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HERC4Q5GLZ8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 B3GAT3P1-201ENST00000471720 806 ntBASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HERC4Q5GLZ8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 FSCN1P1-201ENST00000568912 1481 ntBASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 TNXA-203ENST00000507684 2038 ntBASIC21.11■□□□□ 0.97
HERC4Q5GLZ8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HERC4Q5GLZ8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms