Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 KRT18P29-201ENST00000397031 1267 ntBASIC18.62■□□□□ 0.57
CDKL1Q00532 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.62■□□□□ 0.57
CDKL1Q00532 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKL1Q00532 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL1Q00532 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL1Q00532 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CDKL1Q00532 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKL1Q00532 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKL1Q00532 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.61■□□□□ 0.57
CDKL1Q00532 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.61■□□□□ 0.57
CDKL1Q00532 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKL1Q00532 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 AC006333.2-201ENST00000607957 2099 ntBASIC18.61■□□□□ 0.57
CDKL1Q00532 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDKL1Q00532 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKL1Q00532 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDKL1Q00532 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.6■□□□□ 0.57
CDKL1Q00532 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKL1Q00532 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CDKL1Q00532 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CDKL1Q00532 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKL1Q00532 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.6■□□□□ 0.57
CDKL1Q00532 AC026271.3-201ENST00000571884 352 ntBASIC18.6■□□□□ 0.57
CDKL1Q00532 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKL1Q00532 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKL1Q00532 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKL1Q00532 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDKL1Q00532 FZD10-202ENST00000539839 3282 ntBASIC18.59■□□□□ 0.57
CDKL1Q00532 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 AL390961.4-201ENST00000623958 2535 ntBASIC18.59■□□□□ 0.57
CDKL1Q00532 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDKL1Q00532 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL1Q00532 RPS2P4-201ENST00000476944 856 ntBASIC18.59■□□□□ 0.57
CDKL1Q00532 AF186192.3-201ENST00000583427 947 ntBASIC18.59■□□□□ 0.57
CDKL1Q00532 FAM197Y4-202ENST00000622692 608 ntBASIC18.59■□□□□ 0.57
CDKL1Q00532 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL1Q00532 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL1Q00532 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms