Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX4P78413 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 ATP5G1P1-201ENST00000448724 379 ntBASIC19.65■□□□□ 0.74
IRX4P78413 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 AC006011.2-201ENST00000621313 1158 ntBASIC19.65■□□□□ 0.74
IRX4P78413 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
IRX4P78413 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX4P78413 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX4P78413 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
IRX4P78413 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
IRX4P78413 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
IRX4P78413 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
IRX4P78413 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.64■□□□□ 0.73
IRX4P78413 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.64■□□□□ 0.73
IRX4P78413 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.64■□□□□ 0.73
IRX4P78413 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.64■□□□□ 0.73
IRX4P78413 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
IRX4P78413 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX4P78413 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX4P78413 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX4P78413 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX4P78413 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX4P78413 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX4P78413 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 AL032819.2-201ENST00000624543 2162 ntBASIC19.63■□□□□ 0.73
IRX4P78413 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX4P78413 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX4P78413 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 KRT16P6-202ENST00000425692 1426 ntBASIC19.62■□□□□ 0.73
IRX4P78413 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.62■□□□□ 0.73
IRX4P78413 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
IRX4P78413 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX4P78413 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX4P78413 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.62■□□□□ 0.73
IRX4P78413 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms