Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK3P51956 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.51■□□□□ 0.71
NEK3P51956 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.51■□□□□ 0.71
NEK3P51956 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NEK3P51956 DGCR10-201ENST00000609839 495 ntBASIC19.51■□□□□ 0.71
NEK3P51956 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NEK3P51956 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK3P51956 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NEK3P51956 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
NEK3P51956 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
NEK3P51956 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NEK3P51956 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.5■□□□□ 0.71
NEK3P51956 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK3P51956 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.5■□□□□ 0.71
NEK3P51956 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK3P51956 AC011506.1-201ENST00000474329 610 ntBASIC19.5■□□□□ 0.71
NEK3P51956 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.5■□□□□ 0.71
NEK3P51956 FITM1-202ENST00000559294 800 ntBASIC19.5■□□□□ 0.71
NEK3P51956 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK3P51956 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.5■□□□□ 0.71
NEK3P51956 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.5■□□□□ 0.71
NEK3P51956 AC097493.4-201ENST00000641197 219 ntBASIC19.5■□□□□ 0.71
NEK3P51956 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK3P51956 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
NEK3P51956 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
NEK3P51956 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.49■□□□□ 0.71
NEK3P51956 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NEK3P51956 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 AL390955.1-201ENST00000428694 934 ntBASIC19.49■□□□□ 0.71
NEK3P51956 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.49■□□□□ 0.71
NEK3P51956 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK3P51956 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NEK3P51956 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NEK3P51956 AL049812.1-201ENST00000432563 2267 ntBASIC19.49■□□□□ 0.71
NEK3P51956 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK3P51956 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NEK3P51956 RCC2P6-201ENST00000526625 1557 ntBASIC19.49■□□□□ 0.71
NEK3P51956 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK3P51956 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK3P51956 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.48■□□□□ 0.71
NEK3P51956 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.48■□□□□ 0.71
NEK3P51956 AC012306.2-201ENST00000609350 630 ntBASIC19.48■□□□□ 0.71
NEK3P51956 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.48■□□□□ 0.71
NEK3P51956 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
NEK3P51956 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NEK3P51956 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK3P51956 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.48■□□□□ 0.71
NEK3P51956 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms