Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
THBS1P07996 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS1P07996 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.43■□□□□ 0.38
THBS1P07996 AL031985.4-201ENST00000642138 673 ntBASIC17.43■□□□□ 0.38
THBS1P07996 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 RCC2P6-201ENST00000526625 1557 ntBASIC17.43■□□□□ 0.38
THBS1P07996 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS1P07996 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
THBS1P07996 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS1P07996 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS1P07996 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS1P07996 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
THBS1P07996 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS1P07996 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 HEIH-201ENST00000623091 1652 ntBASIC17.42■□□□□ 0.38
THBS1P07996 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
THBS1P07996 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
THBS1P07996 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS1P07996 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS1P07996 AC091390.4-202ENST00000476426 537 ntBASIC17.42■□□□□ 0.38
THBS1P07996 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
THBS1P07996 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
THBS1P07996 AF186192.3-201ENST00000583427 947 ntBASIC17.42■□□□□ 0.38
THBS1P07996 AC073195.1-201ENST00000607241 877 ntBASIC17.42■□□□□ 0.38
THBS1P07996 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.42■□□□□ 0.38
THBS1P07996 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS1P07996 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS1P07996 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS1P07996 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
THBS1P07996 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS1P07996 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 KRT8P3-201ENST00000519669 1449 ntBASIC17.41■□□□□ 0.38
THBS1P07996 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.41■□□□□ 0.38
THBS1P07996 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
THBS1P07996 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.41■□□□□ 0.38
THBS1P07996 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
THBS1P07996 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.41■□□□□ 0.38
THBS1P07996 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.41■□□□□ 0.38
THBS1P07996 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
THBS1P07996 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
THBS1P07996 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS1P07996 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THBS1P07996 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
THBS1P07996 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.4■□□□□ 0.38
THBS1P07996 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
THBS1P07996 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms